Key Information

Notification of Results and Data Analysis

A typical hybridization will result in multiple raw data files. Users are notified by e-mail when the raw data is available for download from their account on this web site. The Core recognizes that many users will want help performing data analysis. Data analysis is provided through the Informatics/Bioinformatics Shared Service Researchers wishing to meet individually for data analysis and consultation should contact David Mount to schedule an appointment once all the relevant hybridizations have been completed. The website for the Informatics/Bioinformatics Shared Service is here.

Prices

Although we receive support from the UACC, the Southwest Environmental Health Science Center, and the BIO5 institute, we must recover costs not covered by these supporting institutions as follows (costs are per sample or array):

DNA Sequencing (using either the Ion Torrent PGM or Proton)
Next-Gen Sequencing:
Human Whole Exome Sequencing*$950
46 gene cancer panel mutation analysis$600.00
Custom gene panel sequencing$300-600
RNA Expression
Affymetrix Gene Expression Analysis:
Affymetrix GeneChips$175-400**
Affymetrix hybridization$250-325
RNA Regulation
Epigenetic Analysis:
ChIP on chip DNA methylation analysis (chip plus hyb)$750
ChIP on chip histone acetylation analysis (chip plus hyb)$750
miRNA expression analysis$400
DNA analysis
Affymetrix and Agilent chips for CGH, re-sequencing, and SNP analysis$150-300
Agilent aCGH$325
Affy genotyping$325
Self-service Microarray Scanning
Self service laser scanning of user-hybridized slides$20.00 per 30 minutes
Real-Time PCR or RT/PCRSelf-service RT/PCR or PCR$50 per plate
full service RT/PCR or PCR$12 per reaction, includes RT
Sample Quality ControlAgilent Bioanalyzer $16 full service
Nanodrop spectrophotometry$12/$4 full service/self service


*The Genomics Core is a member of the "certified service provider" program.

**To avoid maintaining an inventory of chips that expire, the Core will assist users in purchasing their Affymetrix and Agilent microarray chips from the manufacturer. Please contact the Core for information on ordering and prices for specific microarrays.